STRINGSTRING
SMAR000760-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000760-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000760-PAannotation not available (316 aa)    
Predicted Functional Partners:
SMAR005846-PA
annotation not available (91 aa)
     
  0.991
SMAR010866-PA
annotation not available (103 aa)
     
  0.991
SMAR006012-PA
annotation not available (107 aa)
     
  0.990
SMAR009527-PA
U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3’-terminal U-tract of U6 snRNA (95 aa)
     
  0.990
SMAR003118-PA
annotation not available (153 aa)
     
  0.987
SMAR014375-PA
annotation not available (522 aa)
     
  0.952
SMAR001208-PA
annotation not available (435 aa)
       
  0.948
SMAR004948-PA
annotation not available (77 aa)
     
 
  0.916
SMAR000934-PA
DIS3-like exonuclease 2; 3’-5’-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3’ end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3’ (1101 aa)
     
 
  0.910
SMAR000311-PA
annotation not available (1236 aa)
         
  0.881
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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