STRINGSTRING
SMAR000789-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000789-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000789-PAannotation not available (162 aa)    
Predicted Functional Partners:
SMAR006084-PA
annotation not available (64 aa)
     
        0.790
SMAR011945-PA
annotation not available (371 aa)
         
  0.692
SMAR011054-PA
annotation not available (2531 aa)
     
   
  0.688
SMAR011661-PA
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (414 aa)
       
      0.674
SMAR013093-PA
annotation not available (2067 aa)
     
   
  0.673
SMAR008696-PA
annotation not available (118 aa)
     
        0.624
SMAR001137-PA
annotation not available (182 aa)
     
        0.624
SMAR007616-PA
annotation not available (237 aa)
           
  0.602
SMAR015061-PA
annotation not available (39 aa)
     
        0.593
SMAR006145-PA
annotation not available (240 aa)
     
        0.525
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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