STRINGSTRING
SMAR000798-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000798-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000798-PAannotation not available (174 aa)    
Predicted Functional Partners:
SMAR007424-PA
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy (501 aa)
           
  0.649
SMAR004142-PA
V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (140 aa)
           
  0.545
SMAR007864-PA
annotation not available (887 aa)
       
  0.509
SMAR002131-PA
annotation not available (819 aa)
       
  0.509
SMAR001095-PA
annotation not available (229 aa)
           
  0.497
SMAR006964-PA
annotation not available (823 aa)
       
 
  0.495
SMAR004132-PA
annotation not available (1191 aa)
           
  0.483
SMAR008393-PA
annotation not available (382 aa)
         
  0.441
SMAR006602-PA
annotation not available (335 aa)
           
  0.429
SMAR000460-PA
annotation not available (333 aa)
           
  0.429
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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