STRINGSTRING
SMAR000816-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000816-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000816-PAannotation not available (505 aa)    
Predicted Functional Partners:
SMAR012443-PA
annotation not available (474 aa)
     
   
  0.663
SMAR010411-PA
annotation not available (658 aa)
           
  0.652
SMAR009922-PA
annotation not available (134 aa)
     
        0.630
SMAR009851-PA
annotation not available (1172 aa)
     
        0.628
SMAR000870-PA
annotation not available (352 aa)
           
  0.598
SMAR011965-PA
annotation not available (489 aa)
     
        0.533
SMAR008803-PA
annotation not available (147 aa)
       
    0.528
SMAR005326-PA
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (704 aa)
       
      0.503
SMAR012734-PA
annotation not available (766 aa)
       
      0.487
SMAR014675-PA
annotation not available (1215 aa)
     
   
  0.480
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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