STRINGSTRING
SMAR000836-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000836-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000836-PAannotation not available (350 aa)    
Predicted Functional Partners:
SMAR009266-PA
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway (182 aa)
     
      0.744
SMAR014383-PA
annotation not available (1036 aa)
     
      0.735
SMAR001861-PA
annotation not available (799 aa)
     
      0.734
SMAR006655-PA
annotation not available (196 aa)
     
      0.734
SMAR000312-PA
annotation not available (431 aa)
           
  0.733
SMAR003674-PA
annotation not available (206 aa)
     
      0.730
SMAR008596-PA
annotation not available (211 aa)
     
      0.705
SMAR010677-PA
annotation not available (741 aa)
           
  0.692
SMAR014248-PA
annotation not available (191 aa)
     
      0.688
SMAR011643-PA
annotation not available (610 aa)
     
      0.688
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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