STRINGSTRING
SMAR000859-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000859-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000859-PAannotation not available (269 aa)    
Predicted Functional Partners:
SMAR012829-PA
annotation not available (296 aa)
       
      0.545
SMAR002293-PA
Uncharacterized protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5 (87 aa)
           
  0.539
SMAR011220-PA
annotation not available (798 aa)
           
  0.536
SMAR007001-PA
annotation not available (1019 aa)
           
  0.536
SMAR001887-PA
annotation not available (443 aa)
           
  0.536
SMAR011584-PA
annotation not available (257 aa)
           
  0.522
SMAR002869-PA
annotation not available (1109 aa)
           
  0.475
SMAR006553-PA
annotation not available (940 aa)
           
  0.435
SMAR007367-PA
annotation not available (1306 aa)
           
  0.428
SMAR008358-PA
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine (1009 aa)
           
  0.416
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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