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SMAR000862-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000862-PA" - Derlin in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000862-PADerlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (246 aa)    
Predicted Functional Partners:
SMAR014027-PA
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (242 aa)
     
0.979
SMAR013111-PA
annotation not available (804 aa)
     
  0.978
SMAR004195-PA
annotation not available (335 aa)
     
  0.953
SMAR006970-PA
annotation not available (565 aa)
     
  0.943
SMAR003099-PA
annotation not available (600 aa)
     
  0.940
SMAR004254-PA
annotation not available (294 aa)
     
  0.922
SMAR010957-PA
annotation not available (473 aa)
     
  0.920
SMAR011581-PA
annotation not available (433 aa)
     
  0.918
SMAR002241-PA
annotation not available (835 aa)
     
  0.915
SMAR003386-PA
annotation not available (330 aa)
     
  0.857
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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