STRINGSTRING
SMAR000878-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000878-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000878-PAannotation not available (136 aa)    
Predicted Functional Partners:
SMAR007480-PA
Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery (217 aa)
     
  0.990
SMAR010801-PA
annotation not available (274 aa)
     
  0.990
SMAR012353-PA
annotation not available (210 aa)
     
  0.990
SMAR008767-PA
annotation not available (1473 aa)
     
  0.990
SMAR005863-PA
Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (125 aa)
     
  0.988
SMAR008841-PA
annotation not available (164 aa)
     
  0.988
SMAR010542-PA
annotation not available (140 aa)
     
  0.984
SMAR003520-PA
annotation not available (246 aa)
     
  0.980
SMAR013412-PA
annotation not available (158 aa)
     
  0.978
SMAR009225-PA
annotation not available (228 aa)
     
  0.975
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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