STRINGSTRING
SMAR000884-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000884-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000884-PAannotation not available (657 aa)    
Predicted Functional Partners:
SMAR013043-PA
annotation not available (956 aa)
     
  0.925
SMAR000182-PA
annotation not available (851 aa)
     
  0.923
SMAR013111-PA
annotation not available (804 aa)
     
  0.884
SMAR001320-PA
annotation not available (1284 aa)
           
  0.834
SMAR005434-PA
annotation not available (612 aa)
     
  0.798
SMAR004254-PA
annotation not available (294 aa)
     
  0.795
SMAR009151-PA
annotation not available (873 aa)
     
   
  0.686
SMAR008720-PA
annotation not available (776 aa)
 
 
   
  0.653
SMAR007788-PA
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs (383 aa)
     
   
  0.652
SMAR004228-PA
annotation not available (676 aa)
           
  0.652
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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