STRINGSTRING
SMAR000940-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000940-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000940-PAannotation not available (578 aa)    
Predicted Functional Partners:
SMAR005770-PA
annotation not available (1770 aa)
       
  0.640
SMAR006646-PA
annotation not available (1869 aa)
     
  0.614
SMAR011186-PA
annotation not available (1110 aa)
       
  0.459
SMAR012458-PA
annotation not available (445 aa)
       
    0.433
SMAR010610-PA
Uncharacterized protein; Involved in transport of proteins from the cis/medial- Golgi to the trans-Golgi network (212 aa)
       
    0.412
SMAR002493-PA
annotation not available (1874 aa)
     
  0.411
SMAR005198-PA
annotation not available (2921 aa)
       
    0.407
SMAR005127-PA
annotation not available (606 aa)
       
      0.405
SMAR007090-PA
annotation not available (2698 aa)
       
      0.400
SMAR006272-PA
annotation not available (1503 aa)
       
    0.400
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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