STRINGSTRING
SMAR001002-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001002-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001002-PAannotation not available (292 aa)    
Predicted Functional Partners:
SMAR008880-PA
annotation not available (1009 aa)
     
0.948
SMAR000883-PA
annotation not available (805 aa)
     
  0.896
SMAR013898-PA
annotation not available (731 aa)
     
  0.868
SMAR000784-PA
annotation not available (695 aa)
     
 
  0.768
SMAR005660-PA
annotation not available (337 aa)
     
 
  0.753
SMAR001914-PA
annotation not available (1126 aa)
   
  0.746
SMAR004026-PA
annotation not available (622 aa)
     
 
  0.715
SMAR012473-PA
annotation not available (894 aa)
   
    0.714
SMAR012470-PA
annotation not available (475 aa)
   
    0.701
SMAR012469-PA
annotation not available (848 aa)
   
    0.701
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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