STRINGSTRING
SMAR001064-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001064-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001064-PAannotation not available (640 aa)    
Predicted Functional Partners:
SMAR005198-PA
annotation not available (2921 aa)
         
  0.536
SMAR005371-PA
annotation not available (303 aa)
         
  0.461
SMAR011463-PA
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (147 aa)
     
 
    0.422
SMAR006646-PA
annotation not available (1869 aa)
       
  0.414
SMAR000588-PA
annotation not available (468 aa)
         
  0.411
SMAR015239-PA
annotation not available (1216 aa)
         
  0.400
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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