STRINGSTRING
SMAR001085-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001085-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001085-PAannotation not available (432 aa)    
Predicted Functional Partners:
SMAR014769-PA
annotation not available (292 aa)
     
  0.884
SMAR013508-PA
annotation not available (625 aa)
     
  0.818
SMAR013862-PA
annotation not available (508 aa)
   
 
  0.807
SMAR005578-PA
annotation not available (685 aa)
   
 
  0.807
SMAR007381-PA
annotation not available (1623 aa)
     
  0.720
SMAR003339-PA
annotation not available (260 aa)
 
 
    0.720
SMAR006009-PA
annotation not available (579 aa)
     
  0.706
SMAR002652-PA
annotation not available (1301 aa)
       
  0.695
SMAR000105-PA
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly (333 aa)
     
   
  0.658
SMAR004000-PA
annotation not available (504 aa)
     
  0.656
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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