STRINGSTRING
SMAR001097-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001097-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001097-PAannotation not available (1844 aa)    
Predicted Functional Partners:
SMAR008615-PA
annotation not available (386 aa)
       
  0.981
SMAR007488-PA
annotation not available (161 aa)
     
  0.974
SMAR012900-PA
annotation not available (631 aa)
     
 
  0.950
SMAR003240-PA
annotation not available (1264 aa)
     
 
  0.938
SMAR015628-PA
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (115 aa)
       
  0.927
SMAR004198-PA
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (104 aa)
       
  0.927
SMAR006963-PA
annotation not available (1272 aa)
     
 
  0.874
SMAR007941-PA
annotation not available (1488 aa)
     
 
  0.858
SMAR014655-PA
annotation not available (818 aa)
     
 
  0.833
SMAR012931-PA
annotation not available (431 aa)
       
 
  0.825
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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