STRINGSTRING
SMAR001129-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001129-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001129-PAannotation not available (700 aa)    
Predicted Functional Partners:
SMAR008443-PA
annotation not available (703 aa)
     
 
  0.969
SMAR003928-PA
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (1670 aa)
   
  0.959
SMAR008447-PA
annotation not available (2550 aa)
     
  0.955
SMAR015497-PA
annotation not available (1108 aa)
   
0.944
SMAR000626-PA
annotation not available (1285 aa)
     
  0.943
SMAR011413-PA
annotation not available (1099 aa)
     
  0.942
SMAR009269-PA
annotation not available (1114 aa)
     
  0.941
SMAR002398-PA
annotation not available (806 aa)
     
  0.930
SMAR010578-PA
annotation not available (293 aa)
     
 
  0.923
SMAR013161-PA
annotation not available (450 aa)
   
 
0.923
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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