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SMAR001172-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001172-PA" - Calcium-transporting ATPase in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001172-PACalcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (877 aa)    
Predicted Functional Partners:
SMAR009001-PA
annotation not available (4116 aa)
     
 
  0.932
SMAR005460-PA
annotation not available (2752 aa)
     
 
  0.880
SMAR002581-PA
annotation not available (515 aa)
     
 
  0.846
SMAR011471-PA
annotation not available (691 aa)
     
 
  0.805
SMAR004595-PA
annotation not available (221 aa)
       
 
  0.769
SMAR003341-PA
annotation not available (149 aa)
     
 
  0.721
SMAR012014-PA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane (554 aa)
     
 
  0.692
SMAR001138-PA
annotation not available (1508 aa)
       
  0.686
SMAR015387-PA
annotation not available (1174 aa)
     
 
  0.668
SMAR007360-PA
annotation not available (720 aa)
     
 
  0.661
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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