STRINGSTRING
SMAR001187-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001187-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001187-PAannotation not available (127 aa)    
Predicted Functional Partners:
SMAR012233-PA
annotation not available (808 aa)
     
  0.766
SMAR011659-PA
annotation not available (212 aa)
       
  0.743
SMAR000986-PA
annotation not available (453 aa)
       
  0.743
SMAR014189-PA
annotation not available (950 aa)
     
  0.733
SMAR013120-PA
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (268 aa)
     
 
  0.733
SMAR012398-PA
annotation not available (710 aa)
       
  0.722
SMAR007397-PA
annotation not available (1593 aa)
     
  0.718
SMAR004557-PA
annotation not available (379 aa)
     
  0.709
SMAR011388-PA
annotation not available (915 aa)
       
  0.704
SMAR009106-PA
annotation not available (1144 aa)
     
  0.700
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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