STRINGSTRING
SMAR001217-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001217-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001217-PAannotation not available (394 aa)    
Predicted Functional Partners:
SMAR007013-PA
annotation not available (651 aa)
     
  0.848
SMAR015256-PA
annotation not available (2046 aa)
     
  0.842
SMAR014345-PA
annotation not available (419 aa)
     
  0.827
SMAR011766-PA
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle (681 aa)
     
  0.822
SMAR002483-PA
annotation not available (342 aa)
     
  0.818
SMAR009207-PA
annotation not available (914 aa)
     
      0.815
SMAR007516-PA
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation (139 aa)
       
  0.806
SMAR014888-PA
Autophagy protein 5; Involved in autophagic vesicle formation (265 aa)
     
  0.806
SMAR013947-PA
annotation not available (125 aa)
     
  0.737
SMAR001122-PA
annotation not available (117 aa)
     
  0.737
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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