STRINGSTRING
SMAR001367-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001367-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001367-PAannotation not available (2156 aa)    
Predicted Functional Partners:
SMAR004637-PA
annotation not available (1868 aa)
     
 
0.909
SMAR004488-PA
annotation not available (278 aa)
     
  0.906
SMAR006468-PA
annotation not available (175 aa)
       
  0.880
SMAR010921-PA
annotation not available (182 aa)
       
  0.823
SMAR007018-PA
annotation not available (903 aa)
       
  0.823
SMAR002291-PA
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (878 aa)
     
  0.787
SMAR008219-PA
annotation not available (1909 aa)
     
  0.778
SMAR003012-PA
annotation not available (606 aa)
     
  0.768
SMAR011022-PA
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (951 aa)
     
  0.761
SMAR000402-PA
annotation not available (856 aa)
     
 
  0.752
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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