STRINGSTRING
SMAR001384-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001384-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001384-PAannotation not available (494 aa)    
Predicted Functional Partners:
SMAR008733-PA
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes (389 aa)
           
  0.652
SMAR006801-PA
annotation not available (786 aa)
     
   
  0.651
SMAR015438-PA
annotation not available (637 aa)
           
  0.649
SMAR012523-PA
annotation not available (177 aa)
           
  0.646
SMAR004280-PA
annotation not available (195 aa)
     
 
    0.638
SMAR008769-PA
annotation not available (812 aa)
         
  0.602
SMAR013062-PA
annotation not available (136 aa)
     
   
  0.575
SMAR010981-PA
annotation not available (2465 aa)
     
 
  0.529
SMAR015452-PA
annotation not available (750 aa)
           
  0.519
SMAR013885-PA
annotation not available (156 aa)
     
   
  0.506
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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