STRINGSTRING
SMAR001385-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001385-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001385-PAannotation not available (275 aa)    
Predicted Functional Partners:
SMAR005156-PA
annotation not available (2085 aa)
       
  0.909
SMAR015574-PA
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity (325 aa)
     
  0.875
SMAR009884-PA
annotation not available (429 aa)
     
  0.861
SMAR002492-PA
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity (284 aa)
     
  0.820
SMAR004154-PA
annotation not available (761 aa)
     
  0.810
SMAR014415-PA
annotation not available (511 aa)
       
  0.793
SMAR005372-PA
annotation not available (2551 aa)
     
  0.780
SMAR010655-PA
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity (215 aa)
     
  0.776
SMAR012148-PA
annotation not available (116 aa)
     
  0.740
SMAR002476-PA
annotation not available (110 aa)
     
  0.740
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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