STRINGSTRING
SMAR001602-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001602-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001602-PAannotation not available (474 aa)    
Predicted Functional Partners:
SMAR002065-PA
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1178 aa)
     
  0.926
SMAR000121-PA
annotation not available (210 aa)
     
  0.922
SMAR007707-PA
annotation not available (275 aa)
     
  0.915
SMAR009998-PA
annotation not available (792 aa)
     
  0.914
SMAR003290-PA
annotation not available (1105 aa)
     
  0.901
SMAR004510-PA
annotation not available (330 aa)
     
  0.886
SMAR011868-PA
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1928 aa)
     
  0.877
SMAR005468-PA
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (2045 aa)
     
  0.877
SMAR014712-PA
annotation not available (559 aa)
     
  0.875
SMAR002307-PA
annotation not available (413 aa)
     
  0.875
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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