STRINGSTRING
SMAR001658-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001658-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001658-PAannotation not available (1040 aa)    
Predicted Functional Partners:
SMAR014675-PA
annotation not available (1215 aa)
     
  0.770
SMAR006646-PA
annotation not available (1869 aa)
       
  0.692
SMAR006148-PA
annotation not available (1637 aa)
         
  0.514
SMAR003083-PA
annotation not available (1573 aa)
     
    0.502
SMAR012896-PA
annotation not available (2828 aa)
     
  0.499
SMAR006648-PA
annotation not available (752 aa)
       
  0.484
SMAR000981-PA
annotation not available (974 aa)
       
  0.484
SMAR005198-PA
annotation not available (2921 aa)
       
  0.469
SMAR008198-PA
annotation not available (1532 aa)
       
0.468
SMAR008099-PA
annotation not available (1360 aa)
       
0.466
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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