STRINGSTRING
SMAR001663-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001663-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001663-PAannotation not available (997 aa)    
Predicted Functional Partners:
SMAR009141-PA
annotation not available (1194 aa)
     
   
  0.810
SMAR000934-PA
DIS3-like exonuclease 2; 3’-5’-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3’ end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3’ (1101 aa)
           
  0.595
SMAR011446-PA
annotation not available (947 aa)
     
   
  0.586
SMAR005627-PA
annotation not available (1018 aa)
     
   
  0.586
SMAR014496-PA
annotation not available (247 aa)
           
  0.518
SMAR008135-PA
annotation not available (393 aa)
     
   
  0.438
SMAR009054-PA
annotation not available (458 aa)
           
  0.436
SMAR002031-PA
annotation not available (1267 aa)
           
  0.416
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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