STRINGSTRING
SMAR001688-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001688-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001688-PAannotation not available (382 aa)    
Predicted Functional Partners:
SMAR010889-PA
annotation not available (1151 aa)
     
  0.999
SMAR014019-PA
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum (95 aa)
     
  0.987
SMAR009869-PA
annotation not available (476 aa)
     
  0.968
SMAR009127-PA
annotation not available (68 aa)
     
  0.939
SMAR010539-PA
annotation not available (666 aa)
     
 
  0.911
SMAR013162-PA
annotation not available (2131 aa)
     
 
  0.899
SMAR008947-PA
ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail- anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...] (342 aa)
     
  0.872
SMAR004678-PA
annotation not available (600 aa)
     
 
  0.811
SMAR004656-PA
annotation not available (1323 aa)
           
  0.811
SMAR007104-PA
annotation not available (144 aa)
     
   
  0.789
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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