STRINGSTRING
SMAR001700-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001700-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001700-PAannotation not available (773 aa)    
Predicted Functional Partners:
SMAR003930-PA
annotation not available (824 aa)
   
  0.710
SMAR002911-PA
annotation not available (431 aa)
     
 
  0.479
SMAR013510-PA
annotation not available (482 aa)
     
  0.468
SMAR001856-PA
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1702 aa)
     
  0.455
SMAR002413-PA
annotation not available (722 aa)
     
 
  0.443
SMAR013329-PA
annotation not available (391 aa)
     
  0.427
SMAR011450-PA
annotation not available (2254 aa)
     
 
  0.419
SMAR004192-PA
annotation not available (624 aa)
       
 
  0.410
SMAR003165-PA
annotation not available (456 aa)
       
 
  0.410
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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