STRINGSTRING
SMAR001707-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001707-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001707-PAannotation not available (386 aa)    
Predicted Functional Partners:
SMAR014787-PA
annotation not available (131 aa)
     
 
  0.943
SMAR012714-PA
annotation not available (1309 aa)
     
 
  0.912
SMAR014214-PA
annotation not available (412 aa)
     
 
  0.830
SMAR009869-PA
annotation not available (476 aa)
     
 
  0.779
SMAR014019-PA
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum (95 aa)
     
  0.755
SMAR007028-PA
annotation not available (550 aa)
     
   
  0.696
SMAR002682-PA
annotation not available (3881 aa)
     
   
  0.685
SMAR007855-PA
annotation not available (219 aa)
           
  0.651
SMAR005062-PA
annotation not available (855 aa)
 
            0.650
SMAR014969-PA
annotation not available (178 aa)
     
 
  0.626
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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