STRINGSTRING
SMAR001709-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001709-PA" - annotation not available in Strigamia maritima
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001709-PAannotation not available (316 aa)    
Predicted Functional Partners:
SMAR011949-PA
annotation not available (1049 aa)
   
 
  0.979
SMAR006984-PA
annotation not available (100 aa)
   
  0.953
SMAR008302-PA
annotation not available (190 aa)
   
 
  0.904
SMAR003642-PA
Serine hydroxymethyltransferase; Interconversion of serine and glycine; Belongs to the SHMT family (519 aa)
   
 
  0.876
SMAR007473-PA
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives; Belongs to the radical SAM superfamily. Lipoyl synthase family (2156 aa)
   
   
  0.865
SMAR013026-PA
annotation not available (238 aa)
   
 
  0.863
SMAR013089-PA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (261 aa)
     
 
  0.850
SMAR008214-PA
annotation not available (2505 aa)
     
   
  0.842
SMAR010381-PA
annotation not available (667 aa)
   
 
  0.840
SMAR014483-PA
Enolase-phosphatase E1; Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) (900 aa)
   
 
  0.839
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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