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SMAR001856-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001856-PA" - DNA-directed RNA polymerase subunit in Strigamia maritima
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001856-PADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1702 aa)    
Predicted Functional Partners:
SMAR009972-PA
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1149 aa)
 
  0.998
SMAR006809-PA
annotation not available (1087 aa)
     
  0.995
SMAR008162-PA
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1090 aa)
 
  0.992
SMAR009059-PA
annotation not available (573 aa)
     
  0.990
SMAR009025-PA
annotation not available (339 aa)
   
  0.989
SMAR007384-PA
annotation not available (638 aa)
     
  0.988
SMAR008703-PA
annotation not available (209 aa)
     
  0.986
SMAR007526-PA
annotation not available (207 aa)
     
  0.985
SMAR002682-PA
annotation not available (3881 aa)
   
  0.985
SMAR011211-PA
annotation not available (106 aa)
     
  0.984
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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