STRINGSTRING
SMAR001914-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001914-PA" - annotation not available in Strigamia maritima
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001914-PAannotation not available (1126 aa)    
Predicted Functional Partners:
SMAR008660-PA
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (765 aa)
     
  0.999
SMAR012473-PA
annotation not available (894 aa)
     
0.998
SMAR003369-PA
annotation not available (1428 aa)
   
  0.998
SMAR009793-PA
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (634 aa)
     
  0.997
SMAR011647-PA
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (422 aa)
     
  0.996
SMAR013963-PA
annotation not available (275 aa)
     
  0.995
SMAR006704-PA
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (800 aa)
     
  0.995
SMAR007550-PA
annotation not available (256 aa)
     
  0.995
SMAR015684-PA
annotation not available (520 aa)
     
 
  0.995
SMAR005576-PA
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation (478 aa)
     
0.993
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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