STRINGSTRING
SMAR001916-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001916-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001916-PAannotation not available (364 aa)    
Predicted Functional Partners:
SMAR011435-PA
annotation not available (223 aa)
     
 
  0.971
SMAR005852-PA
annotation not available (391 aa)
     
 
  0.960
SMAR007783-PA
annotation not available (229 aa)
     
 
  0.919
SMAR007809-PA
annotation not available (2701 aa)
     
 
  0.895
SMAR000835-PA
annotation not available (451 aa)
           
  0.662
SMAR005190-PA
annotation not available (2112 aa)
     
   
  0.656
SMAR005832-PA
annotation not available (580 aa)
           
  0.650
SMAR002960-PA
annotation not available (890 aa)
     
 
  0.622
SMAR014228-PA
annotation not available (720 aa)
     
 
  0.598
SMAR011765-PA
annotation not available (461 aa)
     
   
  0.588
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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