STRINGSTRING
SMAR001946-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001946-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001946-PAannotation not available (705 aa)    
Predicted Functional Partners:
SMAR007328-PA
annotation not available (2370 aa)
       
  0.924
SMAR008757-PA
annotation not available (1076 aa)
     
  0.893
SMAR002618-PA
annotation not available (927 aa)
     
 
  0.853
SMAR008771-PA
annotation not available (354 aa)
 
   
  0.842
SMAR010070-PA
annotation not available (305 aa)
   
  0.812
SMAR006557-PA
annotation not available (325 aa)
     
 
  0.796
SMAR011666-PA
annotation not available (4140 aa)
   
 
  0.771
SMAR014027-PA
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (242 aa)
     
      0.734
SMAR000862-PA
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (246 aa)
     
      0.734
SMAR012322-PA
annotation not available (516 aa)
 
 
  0.707
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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