STRINGSTRING
SMAR001977-PA protein (Strigamia maritima) - STRING interaction network
"SMAR001977-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR001977-PAannotation not available (382 aa)    
Predicted Functional Partners:
SMAR013997-PA
annotation not available (260 aa)
     
    0.925
SMAR002682-PA
annotation not available (3881 aa)
     
 
  0.872
SMAR002847-PA
annotation not available (880 aa)
     
 
  0.796
SMAR007522-PA
annotation not available (208 aa)
     
 
  0.709
SMAR008717-PA
annotation not available (570 aa)
     
 
    0.709
SMAR002293-PA
Uncharacterized protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5 (87 aa)
     
 
    0.697
SMAR013061-PA
annotation not available (119 aa)
     
 
    0.696
SMAR006739-PA
annotation not available (224 aa)
     
 
    0.696
SMAR015366-PA
annotation not available (358 aa)
     
 
    0.696
SMAR014675-PA
annotation not available (1215 aa)
           
  0.692
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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