STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1IMQ7_STRMMCa_chan_IQ domain-containing protein. (534 aa)    
Predicted Functional Partners:
T1JB25_STRMM
Uncharacterized protein.
   
 0.997
T1JCY7_STRMM
FMN_red domain-containing protein.
    
 0.883
T1IR84_STRMM
WD_REPEATS_REGION domain-containing protein.
    
 0.870
T1J019_STRMM
Uncharacterized protein.
    
 0.869
T1II76_STRMM
Uncharacterized protein.
   
 0.819
T1II77_STRMM
VWFA domain-containing protein.
   
 0.819
T1J4G3_STRMM
VWFA domain-containing protein.
   
 0.819
T1J4G4_STRMM
VWFA domain-containing protein.
   
 0.819
T1J6N1_STRMM
VASt domain-containing protein.
    
 0.800
T1IGY1_STRMM
WD_REPEATS_REGION domain-containing protein.
   
 0.787
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.