STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1IUV1_STRMMUncharacterized protein. (680 aa)    
Predicted Functional Partners:
T1ISI1_STRMM
Uncharacterized protein.
    
 0.855
T1JFL0_STRMM
WD_REPEATS_REGION domain-containing protein.
    
 0.583
T1J0D9_STRMM
Uncharacterized protein.
    
 0.573
T1IXQ6_STRMM
CRC domain-containing protein.
    
 0.570
T1IXW4_STRMM
DIRP domain-containing protein.
    
 0.555
T1IRF8_STRMM
RPA_C domain-containing protein.
    
 0.520
T1J681_STRMM
RPA_C domain-containing protein.
    
 0.520
T1INJ3_STRMM
WSC domain-containing protein.
    
 0.505
T1IQ75_STRMM
Uncharacterized protein.
    
  0.498
T1IJW3_STRMM
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.494
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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