STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1J1T4_STRMMPI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family. (1403 aa)    
Predicted Functional Partners:
T1J7E0_STRMM
Uncharacterized protein.
    
 0.988
T1JIJ0_STRMM
Uncharacterized protein.
   
 0.982
T1J0F4_STRMM
BTB domain-containing protein.
    
 0.976
T1JDF4_STRMM
Uncharacterized protein.
   
 0.971
T1IJL6_STRMM
Uncharacterized protein.
   
 
 0.959
T1IIU2_STRMM
eRF1_1 domain-containing protein.
    
 
 0.953
T1J7R6_STRMM
Uncharacterized protein.
    
 0.946
T1JIT5_STRMM
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]
    
 
 0.940
T1J570_STRMM
Uncharacterized protein.
    
 0.938
T1JL47_STRMM
Uncharacterized protein.
    
 0.935
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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