STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1J5M8_STRMMC2H2-type domain-containing protein. (402 aa)    
Predicted Functional Partners:
T1JDX3_STRMM
Uncharacterized protein.
   
 
 0.983
T1IIQ6_STRMM
Uncharacterized protein.
   
 
 0.974
T1ITM3_STRMM
Collagen_mid domain-containing protein.
   
   0.937
T1JJG7_STRMM
Matrin-type domain-containing protein.
   
 
 0.698
T1JEU5_STRMM
Uncharacterized protein.
    
 
 0.641
T1JIR1_STRMM
RRM domain-containing protein.
   
    0.600
T1JLW6_STRMM
RRM domain-containing protein.
   
    0.600
T1J374_STRMM
Uncharacterized protein.
   
   0.565
T1J9P5_STRMM
Uncharacterized protein.
   
   0.565
T1JH34_STRMM
RRM domain-containing protein.
   
   0.565
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.