STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1J848_STRMMGATA-type domain-containing protein. (415 aa)    
Predicted Functional Partners:
T1IV46_STRMM
Fork-head domain-containing protein.
    
 0.908
T1IHS9_STRMM
BHLH domain-containing protein.
   
 0.874
T1J6X4_STRMM
Runt domain-containing protein.
    
 0.863
T1IZ74_STRMM
LID domain-containing protein.
    
 0.837
T1ITH6_STRMM
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.805
T1IPR1_STRMM
MADS-box domain-containing protein.
    
 0.779
T1IZ40_STRMM
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.764
T1J1G8_STRMM
Uncharacterized protein.
    
 0.755
T1IL11_STRMM
POU domain protein.
   
 0.752
T1J3X1_STRMM
Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 0.752
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.