STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1JFZ2_STRMMIntegrase catalytic domain-containing protein. (334 aa)    
Predicted Functional Partners:
T1ISI1_STRMM
Uncharacterized protein.
    
 0.855
T1JFL0_STRMM
WD_REPEATS_REGION domain-containing protein.
    
 0.583
T1J0D9_STRMM
Uncharacterized protein.
    
 0.573
T1IXQ6_STRMM
CRC domain-containing protein.
    
 0.570
T1IXW4_STRMM
DIRP domain-containing protein.
    
 0.555
T1IRF8_STRMM
RPA_C domain-containing protein.
    
 0.520
T1J681_STRMM
RPA_C domain-containing protein.
    
 0.520
T1J941_STRMM
Integrase_H2C2 domain-containing protein.
  
     0.520
T1IZA1_STRMM
Integrase catalytic domain-containing protein.
  
     0.512
T1IIP0_STRMM
RT_RNaseH_2 domain-containing protein.
  
 
   0.509
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.