STRINGSTRING
AIF39654.1 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"AIF39654.1" - Derived by automated computational analysis using gene prediction method: Protein Homology in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIF39654.1Derived by automated computational analysis using gene prediction method- Protein Homology (184 aa)    
Predicted Functional Partners:
AIF39655.1
Derived by automated computational analysis using gene prediction method- Protein Homology (466 aa)
              0.789
HX89_12900
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
   
          0.713
HX89_00180
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (393 aa)
   
          0.707
HX89_06605
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
   
          0.651
HX89_13680
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (189 aa)
   
          0.621
HX89_04115
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
   
          0.614
HX89_09405
Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family (366 aa)
   
          0.612
HX89_04885
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
   
          0.605
HX89_02100
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (351 aa)
   
          0.577
HX89_11740
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (233 aa)
   
          0.473
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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