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HX89_00125 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_00125" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_00125Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (408 aa)    
Predicted Functional Partners:
HX89_04595
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (859 aa)
 
     
  0.699
HX89_10390
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method- Protein Homology (346 aa)
 
   
  0.631
HX89_02780
Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1391 aa)
   
   
  0.596
HX89_12710
Carboxymethylenebutenolidase; Derived by automated computational analysis using gene prediction method- Protein Homology (186 aa)
   
   
  0.586
HX89_09310
Glucosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (376 aa)
   
   
  0.547
HX89_05420
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (86 aa)
   
          0.528
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (889 aa)
              0.518
HX89_00130
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (161 aa)
              0.498
HX89_12580
7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin (323 aa)
   
        0.491
HX89_11680
Transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology (248 aa)
 
     
  0.478
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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