STRINGSTRING
HX89_00405 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_00405" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_00405Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (455 aa)    
Predicted Functional Partners:
HX89_06560
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (497 aa)
 
   
  0.702
HX89_05965
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (375 aa)
   
        0.680
HX89_09925
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (280 aa)
   
        0.669
HX89_08225
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
   
          0.668
HX89_10230
Phosphosugar isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (417 aa)
   
        0.659
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (95 aa)
              0.616
HX89_11680
Transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology (248 aa)
   
          0.615
HX89_01405
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
   
          0.615
HX89_12220
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (320 aa)
   
          0.607
HX89_00395
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (220 aa)
   
        0.594
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
Server load: low (7%) [HD]