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HX89_00545 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_00545" - Sugar ABC transporter substrate-binding protein in Dermacoccus nishinomiyaensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
HX89_00545Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)    
Predicted Functional Partners:
HX89_00525
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (273 aa)
  0.995
HX89_00530
Ribose ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (359 aa)
     
  0.965
HX89_00540
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (446 aa)
              0.494
HX89_12865
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (879 aa)
       
 
  0.462
HX89_02830
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (508 aa)
       
 
  0.462
HX89_01700
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (475 aa)
       
 
  0.462
HX89_00535
Acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (72 aa)
              0.453
HX89_08690
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)
 
   
  0.416
HX89_08790
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (203 aa)
       
      0.400
HX89_07460
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (175 aa)
       
      0.400
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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