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HX89_00635 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_00635" - Jag in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_00635Jag; Derived by automated computational analysis using gene prediction method- Protein Homology (165 aa)    
Predicted Functional Partners:
HX89_00640
Preprotein translocase subunit YidC; Derived by automated computational analysis using gene prediction method- Protein Homology (387 aa)
   
  0.971
rsmG
Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA (255 aa)
   
   
  0.832
HX89_00645
Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane (70 aa)
   
        0.758
HX89_00705
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (179 aa)
   
        0.667
HX89_09660
UPF0109 protein HX89_09660; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0109 family (80 aa)
   
 
  0.656
HX89_08120
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (199 aa)
   
          0.469
HX89_06370
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (98 aa)
   
          0.423
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (501 aa)
         
  0.401
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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