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HX89_01735 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_01735" - Regulatory protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_01735Regulatory protein; Derived by automated computational analysis using gene prediction method- Protein Homology (138 aa)    
Predicted Functional Partners:
HX89_08775
Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology (59 aa)
   
          0.732
HX89_03105
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (93 aa)
   
          0.623
HX89_01745
Topoisomerase II; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
              0.614
HX89_12580
7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin (323 aa)
              0.584
HX89_12780
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (286 aa)
   
          0.573
HX89_03930
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (189 aa)
   
          0.572
HX89_01730
Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (274 aa)
              0.564
HX89_08715
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (246 aa)
   
          0.539
HX89_10230
Phosphosugar isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (417 aa)
   
        0.538
HX89_10880
GlcNAc-PI de-N-acetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (289 aa)
   
          0.484
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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