STRINGSTRING
HX89_01760 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_01760" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_01760Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (144 aa)    
Predicted Functional Partners:
pheA
Prephenate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (374 aa)
              0.887
HX89_01755
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (208 aa)
              0.750
HX89_01750
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (715 aa)
 
     
  0.656
HX89_06255
DNA topoisomerase (ATP-hydrolyzing); Derived by automated computational analysis using gene prediction method- Protein Homology (709 aa)
   
 
  0.595
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (713 aa)
   
 
  0.595
HX89_07085
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1196 aa)
   
 
  0.564
HX89_04425
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (223 aa)
 
     
  0.545
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (940 aa)
   
 
  0.540
HX89_01075
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (443 aa)
   
 
  0.518
HX89_06890
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves (318 aa)
     
 
  0.480
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
Server load: low (5%) [HD]