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HX89_02055 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_02055" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_02055Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)    
Predicted Functional Partners:
HX89_02060
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (390 aa)
 
        0.975
HX89_02065
Acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (425 aa)
 
        0.958
HX89_13390
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family (290 aa)
 
        0.739
HX89_12170
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (263 aa)
   
          0.658
HX89_02050
UDP-galactose-4-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family (339 aa)
   
        0.561
HX89_07440
Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1262 aa)
         
  0.545
HX89_13865
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (243 aa)
   
          0.513
HX89_03610
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (286 aa)
   
          0.497
HX89_03230
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (490 aa)
   
          0.492
HX89_09210
Thioesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (159 aa)
 
          0.485
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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