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HX89_02425 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_02425" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_02425Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (327 aa)    
Predicted Functional Partners:
HX89_02440
Amine oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (581 aa)
     
  0.990
HX89_02435
Lycopene cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (105 aa)
 
          0.922
HX89_02430
Lycopene cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (156 aa)
 
          0.853
HX89_02455
Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (493 aa)
 
   
  0.754
HX89_13755
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (529 aa)
   
        0.602
HX89_07815
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (136 aa)
   
 
  0.557
HX89_07700
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (108 aa)
   
 
  0.557
HX89_11615
2,4-dienoyl-CoA reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (714 aa)
   
   
  0.456
HX89_01375
Sulfurtransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (187 aa)
   
        0.455
HX89_01070
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (944 aa)
   
          0.419
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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