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HX89_02830 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_02830" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_02830Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (508 aa)    
Predicted Functional Partners:
HX89_02825
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)
 
  0.976
HX89_01695
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (225 aa)
 
  0.850
HX89_02520
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (241 aa)
 
  0.843
HX89_11580
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)
 
  0.788
HX89_01700
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (475 aa)
   
          0.742
HX89_12860
Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (225 aa)
 
  0.739
HX89_10180
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
 
  0.726
HX89_11795
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (226 aa)
 
  0.701
HX89_11890
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
 
 
  0.545
HX89_11360
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (287 aa)
   
 
 
  0.540
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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