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HX89_02975 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_02975" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_02975Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (132 aa)    
Predicted Functional Partners:
secY
Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (437 aa)
     
 
  0.711
HX89_04625
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (174 aa)
   
          0.692
HX89_08065
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (445 aa)
   
          0.572
HX89_02980
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (154 aa)
              0.487
HX89_02985
Dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (266 aa)
 
          0.456
HX89_03010
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (222 aa)
   
          0.449
HX89_08275
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (340 aa)
   
        0.445
HX89_04865
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (146 aa)
   
          0.418
HX89_13165
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (598 aa)
   
          0.413
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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